STRINGSTRING
XCC1064 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1064" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1064annotation not available (228 aa)    
Predicted Functional Partners:
XCC1063
annotation not available (176 aa)
 
          0.976
XCC1065
annotation not available (87 aa)
          0.771
XCC1066
annotation not available (100 aa)
 
          0.726
CAP51421.1
Transposase and inactivated derivatives (68 aa)
   
          0.670
CAP52646.1
Restriction endonuclease (296 aa)
 
          0.649
CAP51729.1
Chromosome segregation ATPases (351 aa)
   
          0.584
CAP52472.1
Type V secretory pathway, adhesin AidA (1331 aa)
   
          0.573
CAP52000.1
Phage-related minor tail protein (1340 aa)
   
          0.557
XCC2097
Transposase and inactivated derivatives, TnpA family (212 aa)
   
          0.553
XCC1062
annotation not available (555 aa)
              0.536
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]