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XCC1042 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1042" - Glycerophosphoryl diester phosphodiesterase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1042Glycerophosphoryl diester phosphodiesterase (315 aa)    
Predicted Functional Partners:
eutA
Ethanolamine ammonia-lyase large subunit (469 aa)
         
    0.900
eutC
Ethanolamine ammonia-lyase small subunit; Belongs to the EutC family (272 aa)
         
    0.900
XCC1041
Outer membrane receptor proteins, mostly Fe transport (1034 aa)
 
          0.883
XCC4234
Glycerophosphoryl diester phosphodiesterase (392 aa)
         
    0.800
XCC3209
Outer membrane receptor proteins mostly Fe transport (926 aa)
 
          0.714
XCC1043
annotation not available (279 aa)
   
        0.642
XCC2595
annotation not available (272 aa)
   
 
      0.597
mdtC
Transport protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1028 aa)
           
  0.589
mdtB
Transport protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1166 aa)
           
  0.589
yagT
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs (222 aa)
           
  0.589
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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