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acnD protein (Xanthomonas campestris campestris) - STRING interaction network
"acnD" - Aconitate hydratase 1 in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acnDAconitate hydratase 1; Aconitase A (864 aa)    
Predicted Functional Partners:
prpC
Citrate synthase; Belongs to the citrate synthase family (384 aa)
  0.995
prpF
Uncharacterized protein conserved in bacteria (399 aa)
 
 
  0.993
XCC1034
Uncharacterized protein (110 aa)
              0.845
XCC1035
Plasmid stabilization system protein (105 aa)
              0.845
gltA
Citrate synthase; Belongs to the citrate synthase family (452 aa)
 
 
  0.824
acnB
Aconitate hydratase B; Aconitase B; Belongs to the aconitase/IPM isomerase family (863 aa)
   
 
  0.743
prpB
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate; Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family (298 aa)
 
 
  0.724
sucA
2-oxoglutarate dehydrogenase complex,dehydrogenase (E1) component, and related enzymes (990 aa)
   
 
  0.707
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (467 aa)
 
   
  0.675
sdhA
Succinate dehydrogenase/fumarate reductase flavoprotein subunits; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily (596 aa)
   
   
  0.666
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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