STRINGSTRING
CAP52714.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52714.1" - Unknown in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52714.1Unknown (41 aa)    
Predicted Functional Partners:
XCC1011
Uncharacterized protein (100 aa)
 
          0.964
CAP52712.1
Unknown (272 aa)
 
          0.953
XCC1012
Uncharacterized protein (388 aa)
 
          0.948
XCC1010
Uncharacterized protein; Glycosyltransferases involved in cell wall biogenesis (166 aa)
 
          0.921
XCC1009
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family (618 aa)
              0.634
slp
Starvation-inducible outer membrane lipoprotein (178 aa)
              0.478
XCC1006
Uncharacterized protein; Transglutaminase-like enzymes putative cysteine proteases (649 aa)
              0.478
XCC1007
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) (318 aa)
              0.478
XCC1008
Methanol dehydrogenase regulator; MoxR-like ATPases (317 aa)
              0.478
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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