STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1008Methanol dehydrogenase regulator; MoxR-like ATPases (317 aa)    
Predicted Functional Partners:
XCC1006
Uncharacterized protein; Transglutaminase-like enzymes putative cysteine proteases
 
   
 0.963
XCC1007
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
   
 0.954
slp
Starvation-inducible outer membrane lipoprotein
       0.898
XCC1009
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
       0.745
XCC1012
Uncharacterized protein
       0.618
sod4
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems
      
 0.610
XCC3226
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
 
  
 0.595
XCC1010
Uncharacterized protein; Glycosyltransferases involved in cell wall biogenesis
       0.590
cat1
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily
      
 0.584
XCC0090
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
   
 0.531
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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