STRINGSTRING
XCC0986 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0986" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0986annotation not available (218 aa)    
Predicted Functional Partners:
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (245 aa)
   
 
  0.882
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (150 aa)
   
   
  0.855
XCC2267
annotation not available (229 aa)
 
 
  0.830
XCC0984
Murein hydrolase D; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (388 aa)
 
 
  0.823
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (255 aa)
   
   
  0.784
XCC3794
annotation not available (223 aa)
   
          0.783
XCC2935
Uncharacterized protein; Type V secretory pathway, adhesin AidA (504 aa)
   
 
      0.782
XCC2621
annotation not available (208 aa)
   
          0.782
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
        0.781
XCC3764
annotation not available (352 aa)
   
          0.781
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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