STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0984Murein hydrolase D; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (388 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
     
 0.901
XCC0986
annotation not available
 
 
 0.823
XCC2557
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
 
  
 0.784
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
 
 
 0.741
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
  
  
 0.726
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
     
 0.721
slt
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
 
  
 0.716
XCC2360
Signal transduction histidine kinase
  
  
 0.633
XCC1185
annotation not available
  
  
 0.594
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins
  
  
 0.562
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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