STRINGSTRING
pimA protein (Xanthomonas campestris campestris) - STRING interaction network
"pimA" - Glycosyltransferase in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimAGlycosyltransferase (443 aa)    
Predicted Functional Partners:
spp
Uncharacterized protein; Membrane-associated phospholipid phosphatase (182 aa)
 
          0.926
ugd
Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (448 aa)
   
  0.809
ppx
Exopolyphosphatase; Unnamed protein product; Belongs to the GppA/Ppx family (508 aa)
         
  0.728
ubiE1
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) (295 aa)
 
   
      0.642
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (126 aa)
            0.614
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP); Belongs to the polyphosphate kinase 1 (PPK1) family (700 aa)
              0.588
lpxH
UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (247 aa)
   
        0.584
gla
Nucleotide sugar epimerase; UDP-glucose 4-epimerase (321 aa)
 
 
  0.530
phoR
Two-component system sensor protein; Signal transduction histidine kinase (447 aa)
 
   
  0.489
phoB
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (229 aa)
   
        0.441
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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