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cvpA protein (Xanthomonas campestris campestris) - STRING interaction network
"cvpA" - Uncharacterized membrane protein required for colicin V production in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cvpAUncharacterized membrane protein required for colicin V production (248 aa)    
Predicted Functional Partners:
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family (488 aa)
   
   
  0.948
XCC0759
Outer membrane receptor proteins mostly Fe transport (933 aa)
           
  0.703
purM
Phosphoribosylformylglycinamidine cyclo-ligase; Phosphoribosylaminoimidazole (AIR) synthetase (341 aa)
     
        0.694
XCC0951
annotation not available (355 aa)
 
        0.691
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (89 aa)
     
        0.624
imp
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (809 aa)
   
     
  0.609
XCC2385
Outer membrane receptor proteins mostly Fe transport (853 aa)
           
  0.603
folC
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family (433 aa)
   
   
  0.597
XCC0954
Uncharacterized protein conserved in bacteria (266 aa)
              0.592
XCC1892
Outer membrane receptor proteins mostly Fe transport (1033 aa)
           
  0.589
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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