STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0946Outer membrane receptor proteins mostly Fe transport (774 aa)    
Predicted Functional Partners:
XCC1163
Uncharacterized protein; Predicted protease with the C-terminal PDZ domain
  
     0.737
XCC0947
Non-hemolytic phospholipase C; Unnamed protein product
 
     0.664
XCC1037
Outer membrane receptor proteins mostly Fe transport
  
     0.601
XCC3046
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport
  
    0.581
XCC2395
Outer membrane receptor proteins mostly Fe transport
  
  
 0.573
XCC0675
annotation not available
 
     0.569
CAP50899.1
Outer membrane receptor for ferrienterochelin and colicins
  
    0.568
XCC2400
Outer membrane receptor proteins mostly Fe transport
  
  
 0.555
XCC1179
Outer membrane receptor proteins mostly Fe transport
  
    0.548
fecR
Fe2+-dicitrate sensor, membrane component
  
 
 0.541
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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