STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0936annotation not available (215 aa)    
Predicted Functional Partners:
rluB
Pseudouridine synthase; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family
       0.806
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family
 
     0.797
XCC3763
annotation not available
  
     0.782
XCC0013
Uncharacterized protein
  
     0.781
XCC1742
annotation not available
  
     0.781
XCC2656
annotation not available
  
     0.780
XCC3794
annotation not available
  
     0.780
XCC0986
annotation not available
  
     0.775
XCC3901
annotation not available
  
     0.774
XCC0193
annotation not available
  
     0.770
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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