STRINGSTRING
XCC0925 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0925" - Predicted membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0925Predicted membrane protein (156 aa)    
Predicted Functional Partners:
typA
GTP-binding elongation factor protein; Predicted membrane GTPase involved in stress response (609 aa)
              0.810
XCC2649
annotation not available (181 aa)
   
          0.654
XCC2621
annotation not available (208 aa)
   
          0.614
xpsN
General secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins (261 aa)
   
          0.592
gatAX
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases (542 aa)
              0.589
XCC1572
annotation not available (228 aa)
   
          0.589
XCC0848
annotation not available (139 aa)
   
          0.584
xpsM
annotation not available (213 aa)
   
          0.576
XCC1144
annotation not available (168 aa)
   
          0.576
XCC3657
annotation not available (184 aa)
   
          0.575
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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