STRINGSTRING
gatAX protein (Xanthomonas campestris campestris) - STRING interaction network
"gatAX" - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatAXAsp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases (542 aa)    
Predicted Functional Partners:
xylC
Benzaldehyde dehydrogenase II; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family (493 aa)
   
 
  0.906
XCC1791
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family (510 aa)
   
 
  0.905
acyP
Acylphosphatase; Hydrogenase maturation factor (88 aa)
       
    0.902
gctB
Acyl CoA-acetate/3-ketoacid CoA transferase beta subunit (262 aa)
         
    0.900
gctA
Acyl CoA-acetate/3-ketoacid CoA transferase,alpha subunit (287 aa)
         
    0.900
fldA
Uncharacterized protein conserved in bacteria (351 aa)
         
    0.800
hpd
4-hydroxyphenylpyruvate dioxygenase and related hemolysins (371 aa)
         
    0.800
aspS
Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (588 aa)
   
 
  0.655
asnS
Asparagine--tRNA ligase; Aspartyl/asparaginyl-tRNA synthetases (464 aa)
   
 
  0.612
XCC0925
Predicted membrane protein (156 aa)
              0.589
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]