STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0859Tryptophan repressor binding protein; Multimeric flavodoxin WrbA; Belongs to the WrbA family (198 aa)    
Predicted Functional Partners:
ubiE1
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)
   
  0.906
XCC0858
annotation not available
  
    0.899
XCC0321
Oxidoreductase; Predicted nucleoside-diphosphate-sugar epimerases
   
 
  0.801
yneN
Thioredoxin; Thiol-disulfide isomerase and thioredoxins
  
    0.734
acyP
Acylphosphatase; Hydrogenase maturation factor
       0.729
XCC0860
Predicted membrane protein
       0.729
XCC0270
Putative NADP-dependent oxidoreductases
   
    0.641
XCC3437
Predicted periplasmic or secreted lipoprotein
   
  
 0.562
dnaJ2
Curved DNA binding protein; DnaJ-class molecular chaperone with C-terminal Zn finger domain
   
  
 0.544
XCC2946
DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family
  
  
 0.538
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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