STRINGSTRING
XCC0845 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0845" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0845annotation not available (162 aa)    
Predicted Functional Partners:
XCC0847
ECF sigma factor; DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (203 aa)
 
          0.945
XCC0846
annotation not available (117 aa)
              0.898
XCC3484
annotation not available (239 aa)
   
          0.763
XCC1424
annotation not available (142 aa)
   
          0.762
XCC3383
annotation not available (114 aa)
   
          0.757
XCC2630
annotation not available (107 aa)
   
          0.743
XCC0823
annotation not available (76 aa)
   
          0.739
XCC4130
annotation not available (324 aa)
   
          0.727
XCC2843
Uncharacterized protein (83 aa)
   
          0.717
XCC3783
annotation not available (186 aa)
   
          0.693
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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