STRINGSTRING
XCC0842 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0842" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0842annotation not available (784 aa)    
Predicted Functional Partners:
XCC2919
Chemotaxis signal transduction protein (158 aa)
   
          0.751
ank2
Ankyrin-like protein; FOG- Ankyrin repeat (1107 aa)
   
      0.739
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
          0.711
XCC0711
Unnamed protein product (576 aa)
   
          0.703
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (499 aa)
     
 
  0.689
XCC1144
annotation not available (168 aa)
   
          0.681
XCC0484
Two-component system regulatory protein; FOG- EAL domain (650 aa)
   
          0.667
XCC2788
Uncharacterized protein conserved in bacteria (387 aa)
   
          0.665
XCC2332
annotation not available (172 aa)
   
          0.652
XCC0986
annotation not available (218 aa)
   
 
      0.650
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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