STRINGSTRING
oxyR protein (Xanthomonas campestris campestris) - STRING interaction network
"oxyR" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxyRTranscriptional regulator (313 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase subunit C; Peroxiredoxin (187 aa)
         
  0.937
ahpF
Alkyl hydroperoxide reductase large subunit (529 aa)
         
  0.901
cat1
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily (748 aa)
         
  0.899
XCC2579
Reductase; Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (456 aa)
           
  0.804
ohr
Organic hydroperoxide resistance protein; Predicted redox protein regulator of disulfide bond formation (142 aa)
           
  0.727
soxR
Predicted transcriptional regulators (148 aa)
       
 
  0.706
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (442 aa)
       
 
  0.588
iroN
Outer membrane receptor proteins, mostly Fe transport (1003 aa)
           
  0.583
XCC2887
Outer membrane receptor proteins mostly Fe transport (913 aa)
           
  0.583
XCC3161
Outer membrane receptor proteins mostly Fe transport (978 aa)
           
  0.583
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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