STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0826Two-component system regulatory protein; DNA-binding HTH domain-containing proteins (235 aa)    
Predicted Functional Partners:
torS
Two-component system sensor protein; Signal transduction histidine kinase
   
 
 0.902
XCC0824
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
   
   0.882
XCC2360
Signal transduction histidine kinase
   
 
 0.803
XCC1960
HrpX related protein; Signal transduction histidine kinase
 
 
 0.709
XCC1936
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
  
     0.684
XCC2153
Two-component system sensor protein; FOG: PAS/PAC domain
 
 
 
 0.675
XCC1127
Two-component system sensor protein; Signal transduction histidine kinase
 
 
 0.675
gacA
Transcriptional regulator luxR/uhpA family; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
  
     0.673
XCC3910
Two-component system sensor protein; Signal transduction histidine kinase
 
 
 0.653
XCC3909
Two-component system regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
  
     0.621
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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