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XCC0818 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0818" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0818Uncharacterized protein; Outer membrane receptor for Fe3+-dicitrate (145 aa)    
Predicted Functional Partners:
XCC0819
Integral membrane protein; Permeases of the drug/metabolite transporter (DMT) superfamily (309 aa)
              0.845
XCC0817
Uncharacterized protein; Cytosine/adenosine deaminases (186 aa)
              0.622
CAP52900.1
annotation not available (132 aa)
              0.622
rlmM
Ribosomal RNA large subunit methyltransferase M; Catalyzes the 2’-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily (347 aa)
              0.576
XCC0820
Transcriptional regulator; AraC-type DNA-binding domain-containing proteins (247 aa)
              0.536
glnS
Glutamine--tRNA ligase; Glutamyl- and glutaminyl-tRNA synthetases (634 aa)
              0.453
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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