STRINGSTRING
XCC0817 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0817" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0817Uncharacterized protein; Cytosine/adenosine deaminases (186 aa)    
Predicted Functional Partners:
CAP52900.1
annotation not available (132 aa)
              0.889
rlmM
Ribosomal RNA large subunit methyltransferase M; Catalyzes the 2’-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily (347 aa)
              0.797
XCC0818
Uncharacterized protein; Outer membrane receptor for Fe3+-dicitrate (145 aa)
              0.622
XCC0819
Integral membrane protein; Permeases of the drug/metabolite transporter (DMT) superfamily (309 aa)
              0.622
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (927 aa)
         
  0.591
guaA1
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (521 aa)
   
   
  0.542
CAP52118.1
annotation not available (36 aa)
   
          0.493
CAP52112.1
annotation not available (36 aa)
   
          0.493
CAP52111.1
annotation not available (36 aa)
   
          0.493
CAP52117.1
annotation not available (36 aa)
   
          0.492
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (17%) [HD]