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fadD protein (Xanthomonas campestris campestris) - STRING interaction network
"fadD" - Acid-CoA ligase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadDAcid-CoA ligase; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (490 aa)    
Predicted Functional Partners:
ech4
P-hydroxycinnamoyl CoA hydratase/lyase; Enoyl-CoA hydratase/carnithine racemase (275 aa)
 
  0.782
fadB2
3-hydroxyacyl-CoA dehydrogenase (790 aa)
   
 
  0.734
fadE1
Acyl-CoA dehydrogenases (824 aa)
   
 
  0.686
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase (690 aa)
   
 
  0.667
fadA2
3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (401 aa)
   
   
  0.660
fadE2
Acyl-CoA dehydrogenases (597 aa)
   
   
  0.660
fadE4
Acyl-CoA dehydrogenases (393 aa)
 
   
  0.645
fadE3
Acyl-CoA dehydrogenases (382 aa)
 
   
  0.645
aas
2-acylglycerophosphoethanolamine acyltransferase; Permeases of the major facilitator superfamily (640 aa)
   
 
  0.630
badH
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family (489 aa)
 
  0.616
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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