STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0800Hydrolase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (238 aa)    
Predicted Functional Partners:
XCC0801
annotation not available
 
     0.724
thrA
Bifunctional aspartokinase/homoserine dehydrogenase I; Aspartokinases
  
  
 0.609
XCC0799
VisC protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
       0.573
ubiH
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
       0.572
cysNC
Multifunctional fusion protein; Catalyzes the synthesis of activated sulfate; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily
  
  
 0.564
cysI
Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
  
  
 0.510
ligB
annotation not available
 
     0.483
XCC2003
Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
  
  
 0.439
XCC0797
annotation not available
       0.430
XCC0796
Uncharacterized protein
       0.430
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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