STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgkADiacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (126 aa)    
Predicted Functional Partners:
cdsA2
Phosphatidate cytidylyltransferase; CDP-diglyceride synthetase; Belongs to the CDS family
    
 0.914
plsC4
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
    
 0.912
cdsA1
Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
    
 0.908
plsC1
Acetyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase
    
 0.907
plcN
Unnamed protein product
     
  0.900
XCC1694
CDP-diacylglycerol pyrophosphatase; Unnamed protein product
     
  0.900
XCC0947
Non-hemolytic phospholipase C; Unnamed protein product
     
  0.900
XCC0785
annotation not available
       0.855
XCC0784
Glycine rich protein; Beta-propeller domains of methanol dehydrogenase type
       0.848
XCC0783
Uncharacterized protein
       0.848
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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