STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauDProbable taurine catabolism dioxygenase (300 aa)    
Predicted Functional Partners:
XCC0774
ABC transporter substrate binding protein; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
 
 
 0.967
nrtB
Permease; ABC-type nitrate/sulfonate/bicarbonate transport system permease component
 
  
 0.944
nrtCD
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component
 
  
 0.936
sflA
NADH-dependent FMN reductase; Predicted flavoprotein
 
 
 0.922
piuB
annotation not available
 
  
  0.912
sseA
Rhodanese-related sulfurtransferase
  
 
  0.907
cysI
Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
     
 0.905
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite; Belongs to the PAPS reductase family. CysH subfamily
     
 0.902
ggt1
Gamma-glutamyltranspeptidase
     
  0.900
ggt3
Gamma-glutamyltranspeptidase
     
  0.900
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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