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dusB protein (Xanthomonas campestris campestris) - STRING interaction network
"dusB" - tRNA-dihydrouridine synthase B in Xanthomonas campestris campestris
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
dusBtRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (468 aa)    
Predicted Functional Partners:
XCC0508
Putative Fis-like DNA-binding protein; Factor for inversion stimulation Fis transcriptional activator; Belongs to the transcriptional regulatory Fis family (90 aa)
 
   
  0.979
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (89 aa)
   
        0.599
yeiM
Nucleoside permease (432 aa)
              0.576
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (308 aa)
   
   
  0.568
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (927 aa)
 
   
  0.550
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (318 aa)
     
      0.550
rpmH
Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family (46 aa)
   
        0.516
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11 (333 aa)
 
     
  0.510
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (185 aa)
           
  0.503
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (694 aa)
   
 
  0.500
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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