STRINGSTRING
appA protein (Xanthomonas campestris campestris) - STRING interaction network
"appA" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appAannotation not available (443 aa)    
Predicted Functional Partners:
phy
Uncharacterized protein; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) (372 aa)
       
  0.969
XCC0759
Outer membrane receptor proteins mostly Fe transport (933 aa)
 
          0.911
ribE
Riboflavin synthase alpha chain (200 aa)
         
    0.900
ribF
Riboflavin biosynthesis protein; FAD synthase; Belongs to the ribF family (362 aa)
         
    0.900
sflA
NADH-dependent FMN reductase; Predicted flavoprotein (197 aa)
         
    0.900
phoC
Acid phosphatase; Membrane-associated phospholipid phosphatase (280 aa)
   
   
    0.861
XCC3903
Hydrolase; Predicted hydrolase (HAD superfamily) (243 aa)
         
    0.800
XCC2291
Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain (689 aa)
           
  0.702
XCC1041
Outer membrane receptor proteins, mostly Fe transport (1034 aa)
 
          0.647
XCC1104
annotation not available (342 aa)
   
          0.631
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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