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dgd protein (Xanthomonas campestris campestris) - STRING interaction network
"dgd" - D-galactose 1-dehydrogenase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
dgdD-galactose 1-dehydrogenase; Predicted dehydrogenases and related proteins (317 aa)    
Predicted Functional Partners:
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (351 aa)
 
 
  0.933
bga1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family (964 aa)
       
  0.906
bga3
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family (855 aa)
       
  0.906
bga2
Beta-galactosidase (680 aa)
       
    0.901
dgoK
2-keto-3-deoxy-galactonokinase (292 aa)
 
          0.647
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
     
   
  0.574
XCC1745
Regucalcin; Gluconolactonase (303 aa)
 
        0.496
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (335 aa)
     
 
  0.463
XCC2170
Iron dependent repressor; Mn-dependent transcriptional regulator (155 aa)
       
 
  0.457
dgoA
4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase (223 aa)
 
          0.428
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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