STRINGSTRING
XCC0709 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0709" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0709Uncharacterized protein; Predicted membrane-bound metal-dependent hydrolases (179 aa)    
Predicted Functional Partners:
dld
FAD/FMN-containing dehydrogenases (464 aa)
              0.898
XCC0711
Unnamed protein product (576 aa)
 
          0.829
XCC0710
UPF0102 protein XCC0710; Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family (122 aa)
              0.813
XCC0707
annotation not available (199 aa)
              0.774
XCC1169
annotation not available (774 aa)
   
          0.621
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (273 aa)
              0.579
creC
Two-component system sensor protein; Signal transduction histidine kinase (482 aa)
   
        0.566
creD
Inner membrane protein involved in colicin E2 resistance (439 aa)
   
          0.525
XCC1401
annotation not available (300 aa)
   
          0.447
XCC2631
annotation not available (266 aa)
   
          0.425
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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