STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0694annotation not available (207 aa)    
Predicted Functional Partners:
CAP53026.1
annotation not available
       0.845
CAP53027.1
annotation not available
       0.845
oprP2
Phosphate-selective porin
  
     0.710
XCC1583
annotation not available
  
     0.702
XCC3758
annotation not available
  
     0.694
XCC2790
annotation not available
  
     0.681
XCC1169
annotation not available
  
     0.668
XCC0155
annotation not available
  
     0.656
XCC3763
annotation not available
  
     0.653
XCC0848
annotation not available
  
     0.647
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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