STRINGSTRING
XCC0684 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0684" - Serine protease in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0684Serine protease; Function unknown (552 aa)    
Predicted Functional Partners:
XCC0685
annotation not available (129 aa)
              0.899
XCC2666
Subtilisin-like serine proteases (593 aa)
 
     
  0.810
CAP53612.1
Rhs family protein (1850 aa)
     
 
  0.800
xcsN
annotation not available (238 aa)
 
          0.735
hpaP
annotation not available (203 aa)
   
          0.721
celS1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family (271 aa)
   
          0.718
uidR
Transcriptional regulator (209 aa)
   
     
  0.699
CAP51033.1
annotation not available (136 aa)
   
          0.695
XCC3783
annotation not available (186 aa)
   
          0.689
XCC3590
annotation not available (818 aa)
   
 
 
  0.647
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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