STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0680Uncharacterized protein; Hydrolyses the glycosidic bond between a carbohydrate and a second moiety (322 aa)    
Predicted Functional Partners:
XCC0678
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis
 
     0.932
XCC0677
annotation not available
 
   
 0.932
XCC0679
annotation not available
       0.845
XCC1682
Serine kinase of the HPr protein, regulates carbohydrate metabolism
  
     0.631
XCC3191
Uncharacterized protein
  
     0.611
XCC1684
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase and permease components
  
     0.608
XCC2595
annotation not available
  
     0.605
XCC4126
annotation not available
  
     0.599
XCC3075
annotation not available
  
     0.539
XCC2699
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
 
   
 0.536
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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