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pnuC protein (Xanthomonas campestris campestris) - STRING interaction network
"pnuC" - PnuC protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnuCPnuC protein; Nicotinamide mononucleotide transporter (191 aa)    
Predicted Functional Partners:
XCC0674
Putative siderophore receptor; Outer membrane receptor proteins mostly Fe transport (722 aa)
 
          0.816
XCC0675
annotation not available (385 aa)
 
          0.764
xcsC
Type II secretory pathway component PulC (270 aa)
           
  0.642
XCC0672
Transcriptional regulators (242 aa)
         
  0.637
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (436 aa)
         
  0.450
xpsE
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (579 aa)
           
  0.408
xpsD
Type II secretion system protein D; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (759 aa)
           
  0.404
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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