STRINGSTRING
xpsN protein (Xanthomonas campestris campestris) - STRING interaction network
"xpsN" - General secretion pathway protein N in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpsNGeneral secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins (261 aa)    
Predicted Functional Partners:
xpsM
annotation not available (213 aa)
 
     
  0.991
xpsD
Type II secretion system protein D; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (759 aa)
     
  0.989
pefL
Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (373 aa)
 
     
  0.988
xpsI
Type II secretion system protein I; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (138 aa)
 
     
  0.986
xpsG
Type II secretion system protein G; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (143 aa)
 
     
  0.960
xpsJ
Type II secretion system protein J; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (212 aa)
 
          0.960
pefK
Type II secretion system protein K; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (283 aa)
 
          0.942
xpsH
Type II secretion system protein H; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (169 aa)
 
          0.939
xpsF
Type II secretion system protein F; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (405 aa)
         
  0.778
XCC3763
annotation not available (179 aa)
   
          0.776
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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