STRINGSTRING
xpsM protein (Xanthomonas campestris campestris) - STRING interaction network
"xpsM" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpsMannotation not available (213 aa)    
Predicted Functional Partners:
pefL
Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (373 aa)
     
  0.996
xpsN
General secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins (261 aa)
 
     
  0.991
xpsD
Type II secretion system protein D; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (759 aa)
 
     
  0.979
xpsJ
Type II secretion system protein J; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (212 aa)
 
          0.976
xpsI
Type II secretion system protein I; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (138 aa)
 
     
  0.976
xpsH
Type II secretion system protein H; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (169 aa)
 
          0.972
pefK
Type II secretion system protein K; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (283 aa)
 
          0.968
xpsG
Type II secretion system protein G; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (143 aa)
 
     
  0.922
xcsM
Type II secretory pathway, component PulM (150 aa)
         
  0.891
XCC1144
annotation not available (168 aa)
   
          0.706
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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