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pefL protein (Xanthomonas campestris campestris) - STRING interaction network
"pefL" - Type II secretion system protein L in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
pefLType II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (373 aa)    
Predicted Functional Partners:
xpsM
annotation not available (213 aa)
     
  0.996
xpsN
General secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins (261 aa)
 
     
  0.988
xpsD
Type II secretion system protein D; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (759 aa)
 
     
  0.985
xpsH
Type II secretion system protein H; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (169 aa)
 
     
  0.977
xpsI
Type II secretion system protein I; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (138 aa)
 
     
  0.976
xpsJ
Type II secretion system protein J; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (212 aa)
 
     
  0.975
pefK
Type II secretion system protein K; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (283 aa)
 
     
  0.975
xpsG
Type II secretion system protein G; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (143 aa)
 
     
  0.938
xpsE
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (579 aa)
 
 
  0.921
pilO
Tfp pilus assembly protein PilO (221 aa)
 
 
  0.881
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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