STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpsHType II secretion system protein H; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (169 aa)    
Predicted Functional Partners:
xpsJ
Type II secretion system protein J; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
   
 0.992
xpsI
Type II secretion system protein I; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
  
 0.992
xpsG
Type II secretion system protein G; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
  
 0.987
xpsD
Type II secretion system protein D; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
  
  0.984
pefL
Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
   
 0.977
pefK
Type II secretion system protein K; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
     0.975
xpsM
annotation not available
 
     0.972
xpsN
General secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins
 
     0.939
xcsH
Type II secretion system protein H; General secretory pathway proteins G and H and related periplasmic/secreted proteins
     
  0.800
xpsE
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
 
  
 0.698
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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