STRINGSTRING
xadA protein (Xanthomonas campestris campestris) - STRING interaction network
"xadA" - Outer membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xadAOuter membrane protein; Autotransporter adhesin (2351 aa)    
Predicted Functional Partners:
yapH
annotation not available (3961 aa)
 
     
  0.883
XCC0573
annotation not available (632 aa)
 
     
  0.675
XCC2025
Subtilisin-like serine proteases (948 aa)
 
     
  0.638
XCC0694
annotation not available (207 aa)
   
          0.620
XCC0659
Protease; Subtilisin-like serine proteases; Belongs to the peptidase S8 family (643 aa)
         
  0.613
XCC1294
Sensor histidine kinase; FOG- GGDEF domain (578 aa)
     
   
  0.612
XCC1169
annotation not available (774 aa)
   
          0.603
XCC2629
annotation not available (478 aa)
   
          0.593
XCC2790
annotation not available (152 aa)
   
          0.585
XCC1995
annotation not available (181 aa)
   
          0.578
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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