STRINGSTRING
XCC0651 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0651" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0651Uncharacterized protein; Predicted permeases (368 aa)    
Predicted Functional Partners:
XCC0650
Uncharacterized protein; Predicted permeases (360 aa)
 
  0.999
yhbG
ABC transporter ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components (239 aa)
 
 
  0.992
imp
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (809 aa)
 
 
  0.876
CAP53068.1
annotation not available (100 aa)
              0.859
pepA1
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (493 aa)
 
        0.767
holC
DNA polymerase III chi subunit (141 aa)
 
          0.670
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (351 aa)
 
 
  0.651
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins (161 aa)
   
        0.642
waaM
Lipid A biosynthesis lauroyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) (306 aa)
 
   
  0.605
waaA
3-deoxy-D-manno-octulosonic acid transferase; Biosynthesis of the lipid A component of the lipopolysaccharides (LPS) (500 aa)
 
   
  0.601
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (12%) [HD]