STRINGSTRING
XCC0650 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0650" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0650Uncharacterized protein; Predicted permeases (360 aa)    
Predicted Functional Partners:
XCC0651
Uncharacterized protein; Predicted permeases (368 aa)
 
  0.999
yhbG
ABC transporter ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components (239 aa)
   
  0.989
imp
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (809 aa)
 
 
  0.876
CAP53068.1
annotation not available (100 aa)
              0.859
pepA1
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (493 aa)
 
          0.767
holC
DNA polymerase III chi subunit (141 aa)
 
          0.671
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (293 aa)
   
      0.623
XCC4085
Predicted outer membrane protein (690 aa)
   
      0.612
XCC4084
Uncharacterized protein conserved in bacteria (1285 aa)
 
 
      0.589
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (241 aa)
 
        0.569
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]