STRINGSTRING
XCC0647 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0647" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0647Uncharacterized protein; Predicted ATPases (410 aa)    
Predicted Functional Partners:
CAP53074.1
annotation not available (156 aa)
 
          0.943
holC
DNA polymerase III chi subunit (141 aa)
              0.846
CAP51778.1
annotation not available (288 aa)
   
          0.547
CAP51777.1
Uncharacterized protein conserved in bacteria (347 aa)
   
          0.547
pepA1
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (493 aa)
              0.546
XCC0525
ATP-dependent DNA helicase; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (438 aa)
 
          0.537
XCC0650
Uncharacterized protein; Predicted permeases (360 aa)
              0.400
XCC0651
Uncharacterized protein; Predicted permeases (368 aa)
              0.400
CAP53068.1
annotation not available (100 aa)
              0.400
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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