STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0640annotation not available (132 aa)    
Predicted Functional Partners:
XCC2431
annotation not available
  
     0.767
XCC2250
annotation not available
  
     0.765
XCC2715
annotation not available
  
     0.734
XCC2935
Uncharacterized protein; Type V secretory pathway, adhesin AidA
  
     0.733
cheB1
Protein-glutamate methylesterase; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
  
     0.730
XCC2390
annotation not available
  
     0.726
xpsN
General secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins
  
     0.722
XCC0193
annotation not available
  
     0.712
XCC2267
annotation not available
  
     0.712
pssA2
Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family
       0.712
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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