STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wxcIAcyl CoA:acetate/3-ketoacid CoA transferase,alpha subunit (242 aa)    
Predicted Functional Partners:
wxcJ
Acyl CoA:acetate/3-ketoacid CoA transferase,beta subunit
 0.999
hbdH1
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
 
 0.944
fadA3
Acetoacetyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family
 
 
 0.937
fadB2
3-hydroxyacyl-CoA dehydrogenase
  
 
 0.936
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase
  
 
 0.936
mvaB
Hydroxymethylglutaryl-CoA lyase; Isopropylmalate/homocitrate/citramalate synthases
    
 0.935
fadA1
Acyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family
 
 
 0.918
phbB
Acetoacetyl-coA reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  
 
 0.901
XCC2294
Acetoacetyl-CoA reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family
  
 
 0.901
xanB
Xanthan biosynthesis protein XanB; Involved in xanthan production
     
 0.796
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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