STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein beta subunit; Unnamed protein product (248 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein, alpha subunit
 
 0.999
etf-QO
Flavoprotein-ubiquinone oxidoreductase; Dehydrogenases (flavoproteins)
 
  
 0.957
fadE3
Acyl-CoA dehydrogenases
 
 
 0.865
fadE2
Acyl-CoA dehydrogenases
 
 
 0.860
ivd
Acyl-CoA dehydrogenase; Leucine degradation
 
 
 0.837
fadE4
Acyl-CoA dehydrogenases
 
 
 0.828
fadB2
3-hydroxyacyl-CoA dehydrogenase
  
 
 0.782
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase
  
 
 0.782
gcdH
Acyl-CoA dehydrogenases
 
 
 0.732
fadE1
Acyl-CoA dehydrogenases
  
 
 0.711
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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