STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wxcHWxcH protein (115 aa)    
Predicted Functional Partners:
wxcK
Aminotransferase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family
     
 0.869
wxcL
Glycosyltransferases involved in cell wall biogenesis
     
 0.868
wxcN
Predicted membrane protein
     
 0.830
etfA
Electron transfer flavoprotein, alpha subunit
     
 0.812
wxcM
Bifunctional acetyl transferase/isomerase; Tetrahydrodipicolinate N-succinyltransferase
       0.682
etfB
Electron transfer flavoprotein beta subunit; Unnamed protein product
       0.652
wxcD
wxcD; Glycosyltransferase
      
 0.601
wxcE
Exported protein; Involved in LPS biosynthesis
      
 0.581
wxcA
Glycosyltransferase
      
 0.580
wxcO
Integral membrane protein
     
 0.568
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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