STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wxcKAminotransferase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family (367 aa)    
Predicted Functional Partners:
wxcM
Bifunctional acetyl transferase/isomerase; Tetrahydrodipicolinate N-succinyltransferase
   
 0.972
wxcL
Glycosyltransferases involved in cell wall biogenesis
  
 0.959
wxcN
Predicted membrane protein
 
   
 0.949
wxcH
WxcH protein
     
 0.869
XCC1670
Uncharacterized protein; Isomerization of a sugar nucleotide precursor of an unidentified cell surface carbohydrate
   
 0.854
wxcO
Integral membrane protein
     
 0.849
XCC2189
Epimerase/dehydratase protein; Predicted nucleoside-diphosphate sugar epimerases
  
 0.795
etfA
Electron transfer flavoprotein, alpha subunit
     
 0.697
wxcA
Glycosyltransferase
     
 0.641
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase
     
 0.632
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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