STRINGSTRING
wxcE protein (Xanthomonas campestris campestris) - STRING interaction network
"wxcE" - Exported protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wxcEExported protein; Involved in LPS biosynthesis (199 aa)    
Predicted Functional Partners:
wxcD
wxcD; Glycosyltransferase (581 aa)
         
  0.889
wxcC
wxcC; Glycosyltransferase (353 aa)
         
  0.833
wxcA
Glycosyltransferase (461 aa)
         
  0.828
rmd
GDP-4-dehydro-D-rhamnose reductase; Nucleoside-diphosphate-sugar epimerases (312 aa)
         
  0.794
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (344 aa)
         
  0.793
wxcK
Aminotransferase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family (367 aa)
           
  0.621
wxcO
Integral membrane protein (750 aa)
           
  0.605
wxcL
Glycosyltransferases involved in cell wall biogenesis (323 aa)
           
  0.601
wxcH
WxcH protein (115 aa)
           
  0.581
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
              0.561
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (15%) [HD]