STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wxcAGlycosyltransferase (461 aa)    
Predicted Functional Partners:
wxcD
wxcD; Glycosyltransferase
   
 0.947
wxcC
wxcC; Glycosyltransferase
 
   
 0.927
wzt
ATPase components of various ABC-type transport systems, contain duplicated ATPase
 
 
 0.927
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase
 
 
 0.924
wzm
Transport permease protein; ABC-type polysaccharide/polyol phosphate export systems, permease component
 
  
 0.902
rmd
GDP-4-dehydro-D-rhamnose reductase; Nucleoside-diphosphate-sugar epimerases
 
 
 0.849
XCC0598
Cystathionine gamma-lyase-like protein; Cystathionine beta-lyases/cystathionine gamma-synthases
       0.846
wxcE
Exported protein; Involved in LPS biosynthesis
     
 0.828
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
 
  
 0.766
wxcL
Glycosyltransferases involved in cell wall biogenesis
  
 
 0.665
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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