STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uptFannotation not available (72 aa)    
Predicted Functional Partners:
XCC2390
annotation not available
  
     0.775
XCC2504
Uncharacterized protein
  
     0.774
XCC1354
annotation not available
  
     0.773
XCC3453
UPF0250 protein XCC3453; Belongs to the UPF0250 family
  
     0.763
XCC2431
annotation not available
  
     0.755
XCC2739
annotation not available
  
     0.753
XCC0193
annotation not available
  
     0.746
XCC2843
Uncharacterized protein
  
     0.743
XCC1126
Uncharacterized protein; Predicted acetyltransferase GNAT superfamily
  
     0.743
XCC0201
annotation not available
  
     0.740
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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