STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0588annotation not available (111 aa)    
Predicted Functional Partners:
XCC4130
annotation not available
  
     0.754
XCC4179
annotation not available
  
     0.730
CAP50942.1
annotation not available
  
     0.699
XCC3972
annotation not available
  
     0.697
XCC3484
annotation not available
  
     0.681
XCC3758
annotation not available
  
     0.669
XCC1410
annotation not available
  
     0.632
XCC0823
annotation not available
  
     0.626
XCC0571
Uncharacterized protein
  
     0.626
XCC3798
annotation not available
  
     0.619
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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