STRINGSTRING
copB protein (Xanthomonas campestris campestris) - STRING interaction network
"copB" - Uncharacterized protein involved in copper resistance in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBUncharacterized protein involved in copper resistance (491 aa)    
Predicted Functional Partners:
copA
Putative multicopper oxidases (602 aa)
   
  0.985
czcA
Putative cation efflux system, RND-component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1075 aa)
 
     
  0.647
XCC0579
annotation not available (179 aa)
         
  0.583
aldH
Ketoglutarate semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenases (531 aa)
           
  0.581
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (271 aa)
 
     
  0.514
cysM
Cysteine synthase (367 aa)
              0.442
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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